STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SIS01955.1Acyl dehydratase. (196 aa)    
Predicted Functional Partners:
SIS01945.1
Crotonobetainyl-CoA:carnitine CoA-transferase CaiB.
    
 0.977
SIS17300.1
Acyl dehydratase.
  
  
 
0.907
SIS01964.1
acyl-CoA dehydrogenase.
 
    0.712
SIS03680.1
Biotin transport system ATP-binding protein.
   
    0.545
SIS17306.1
succinyl-CoA:acetate CoA-transferase.
  
    0.533
SIS07105.1
Citrate lyase subunit beta / citryl-CoA lyase.
 
  
  0.519
SIS10309.1
Succinylglutamate desuccinylase / Aspartoacylase family protein.
   
    0.514
SIR87228.1
beta-methylmalyl-CoA/L-malyl-CoA lyase.
 
  
  0.496
SIS01974.1
Hypothetical protein.
       0.442
glmS-3
Glutamate mutase subunit S; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
  
    0.429
Your Current Organism:
Natronorubrum thiooxidans
NCBI taxonomy Id: 308853
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