Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SIS00422.1 | SIS00431.1 | SAMN05421752_10736 | SAMN05421752_10737 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | Urea carboxylase. | 0.999 |
SIS00422.1 | SIS20570.1 | SAMN05421752_10736 | SAMN05421752_1284 | Biotin-dependent carboxylase uncharacterized domain-containing protein. | Transcriptional regulator, IclR family. | 0.573 |
SIS00431.1 | SIS00422.1 | SAMN05421752_10737 | SAMN05421752_10736 | Urea carboxylase. | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.999 |
SIS00431.1 | SIS20570.1 | SAMN05421752_10737 | SAMN05421752_1284 | Urea carboxylase. | Transcriptional regulator, IclR family. | 0.580 |
SIS20570.1 | SIS00422.1 | SAMN05421752_1284 | SAMN05421752_10736 | Transcriptional regulator, IclR family. | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.573 |
SIS20570.1 | SIS00431.1 | SAMN05421752_1284 | SAMN05421752_10737 | Transcriptional regulator, IclR family. | Urea carboxylase. | 0.580 |
SIS20570.1 | SIS20574.1 | SAMN05421752_1284 | SAMN05421752_1285 | Transcriptional regulator, IclR family. | 3-keto-5-aminohexanoate cleavage enzyme. | 0.466 |
SIS20570.1 | SIS20581.1 | SAMN05421752_1284 | SAMN05421752_1286 | Transcriptional regulator, IclR family. | Hypothetical protein. | 0.414 |
SIS20574.1 | SIS20570.1 | SAMN05421752_1285 | SAMN05421752_1284 | 3-keto-5-aminohexanoate cleavage enzyme. | Transcriptional regulator, IclR family. | 0.466 |
SIS20574.1 | SIS20581.1 | SAMN05421752_1285 | SAMN05421752_1286 | 3-keto-5-aminohexanoate cleavage enzyme. | Hypothetical protein. | 0.773 |
SIS20581.1 | SIS20570.1 | SAMN05421752_1286 | SAMN05421752_1284 | Hypothetical protein. | Transcriptional regulator, IclR family. | 0.414 |
SIS20581.1 | SIS20574.1 | SAMN05421752_1286 | SAMN05421752_1285 | Hypothetical protein. | 3-keto-5-aminohexanoate cleavage enzyme. | 0.773 |