STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI17625.1Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (265 aa)    
Predicted Functional Partners:
ACI17517.1
OmpA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
ACI17325.2
Flagellar biosynthetic protein flip; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.995
fliG
Flagellar motor switch protein FliG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.994
ACI17971.1
Flagellar motor switch protein FliY; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.994
flgC
Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.
 
  
 0.993
fliF
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
  
 0.993
fliM
Flagellar motor switch protein FliM; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.992
flgK
Flagellar hook protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.990
ACI18250.1
Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.985
ACI17495.1
Flagellar biosynthetic protein FliQ; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.985
Your Current Organism:
Coprothermobacter proteolyticus
NCBI taxonomy Id: 309798
Other names: C. proteolyticus DSM 5265, Coprothermobacter proteolyticus DSM 5265
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.