STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI18997.1Putative sugar uptake ABC transporter permease protein; Identified by match to protein family HMM PF00528. (294 aa)    
Predicted Functional Partners:
ACI19825.1
Putative sugar uptake ABC transporter permease protein; Identified by match to protein family HMM PF00528.
  0.996
ACI18773.1
Putative sugar uptake ABC transporter periplasmic solute-binding protein; Identified by match to protein family HMM PF01547.
  0.988
ACI18747.1
Sugar ABC transporter, permease.
  
   0.854
ACI18611.1
Lactose transport system; Identified by match to protein family HMM PF00528.
 
   0.854
ACI19475.1
Lactose ABC transporter permease; Identified by match to protein family HMM PF00528.
 
   0.854
ACI18535.1
ABC transporter sugar permease; Identified by match to protein family HMM PF00528.
 
   0.854
ACI19180.1
Integral membrane protein, putative; Identified by match to protein family HMM PF00528.
  
   0.854
ACI18467.1
L-arabinose transport system permease protein AraQ.
  
   0.853
ACI19760.1
Putative transport protein; Identified by match to protein family HMM PF00528.
  
   0.853
ACI18451.1
Sugar transport system permease protein, putative; Identified by match to protein family HMM PF00528.
  
   0.850
Your Current Organism:
Dictyoglomus thermophilum
NCBI taxonomy Id: 309799
Other names: D. thermophilum H-6-12, Dictyoglomus thermophilum H-6-12
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