STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI18811.1Putative regulatory protein; Identified by match to protein family HMM PF04055. (470 aa)    
Predicted Functional Partners:
ACI19937.1
Hypothetical protein; Identified by glimmer; putative.
     
 0.784
ACI19983.1
Alpha-rhamnosidase; Identified by match to protein family HMM PF05592; match to protein family HMM PF08531.
  
 
 0.764
ACI19664.1
Conserved hypothetical protein.
 
   
 0.662
ACI19979.1
ABC-type transport system,membrane ATPase component, putative; Identified by match to protein family HMM PF00005; match to protein family HMM PF00664.
       0.483
ACI19354.1
Membrane protein, putative.
       0.479
ACI18268.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
       0.479
ACI19866.1
Hypothetical protein; Identified by glimmer; putative.
       0.415
Your Current Organism:
Dictyoglomus thermophilum
NCBI taxonomy Id: 309799
Other names: D. thermophilum H-6-12, Dictyoglomus thermophilum H-6-12
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