STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI19250.1ABC transporter; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily. (338 aa)    
Predicted Functional Partners:
ACI18324.1
Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
    0.945
ACI19135.1
Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
    0.920
ACI19035.1
Oligopeptide ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM PF08352; match to protein family HMM TIGR01727; Belongs to the ABC transporter superfamily.
 
    
0.819
ACI18647.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Identified by match to protein family HMM PF00496.
 
    0.798
ACI19476.1
Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
    0.778
ACI19274.1
Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
    0.778
ACI18277.1
Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
    0.716
ACI18327.1
Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
  
    0.702
ACI19319.1
Oligopeptide ABC transporter, permease protein; Identified by match to protein family HMM PF00528.
 
    0.668
ACI19708.1
Dipeptide ABC transporter; Identified by match to protein family HMM PF00528.
 
    0.653
Your Current Organism:
Dictyoglomus thermophilum
NCBI taxonomy Id: 309799
Other names: D. thermophilum H-6-12, Dictyoglomus thermophilum H-6-12
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