STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI19878.12-keto-3-deoxygluconate kinase; Identified by match to protein family HMM PF00294. (319 aa)    
Predicted Functional Partners:
ACI19027.1
2-keto-3-deoxygluconate-6-phosphate aldolase; Identified by match to protein family HMM PF01081; match to protein family HMM TIGR01182.
 
 
 0.981
rpe
Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.866
ACI19071.1
Transcriptional regulator, IclR family; Identified by match to protein family HMM PF01614; match to protein family HMM PF01978; match to protein family HMM PF08279; match to protein family HMM PF09339.
 
   
 0.831
araB
L-ribulokinase; Identified by match to protein family HMM PF00370; match to protein family HMM PF02782; match to protein family HMM TIGR01234.
  
 
 0.814
ACI19767.1
Dihydroorotate dehydrogenase superfamily; Identified by match to protein family HMM PF00037; match to protein family HMM PF01180.
  
  
 0.771
ACI18983.1
Succinate dehydrogenase; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; match to protein family HMM PF03486; match to protein family HMM PF07992.
  
 
 0.771
ACI18756.1
5-exo-alcohol dehydrogenase; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.
  
  
 0.761
ACI19324.1
Conserved hypothetical protein.
     
 0.726
ACI18372.1
Hidrolytic enzyme; Identified by match to protein family HMM PF02056.
  
    0.700
ACI19272.1
Fructokinase.
  
     0.678
Your Current Organism:
Dictyoglomus thermophilum
NCBI taxonomy Id: 309799
Other names: D. thermophilum H-6-12, Dictyoglomus thermophilum H-6-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.