STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI18671.1Serine phosphatase; Identified by match to protein family HMM PF07228. (374 aa)    
Predicted Functional Partners:
ACI19363.1
Anti-sigma regulatory factor; Identified by match to protein family HMM PF00571; match to protein family HMM PF02518.
 
 
 0.978
ACI19285.1
Ferredoxin 2; Identified by match to protein family HMM PF04060.
 
     0.954
thiH
Thiazole biosynthesis protein ThiH; Identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR02351.
   
  
 0.926
ACI20052.1
Periplasmic [Fe] hydrogenase 1; Identified by match to protein family HMM PF00037; match to protein family HMM PF00111; match to protein family HMM PF02256; match to protein family HMM PF02906; match to protein family HMM TIGR02512.
 
    0.875
ACI18759.1
Fe-hydrogenase beta subunit; Identified by match to protein family HMM PF00037; match to protein family HMM PF01512.
 
     0.811
ACI18849.1
Ferredoxin 2; Identified by match to protein family HMM PF00037; match to protein family HMM PF04060.
 
     0.774
ACI19858.1
NADH-ubiquinone oxidoreductase 24 kda subunit; Identified by match to protein family HMM PF01257.
       0.751
rex
Redox-sensing transcriptional repressor rex 2; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
     
 0.737
ACI18713.1
Sensory transduction histidine kinase; Identified by match to protein family HMM PF02518.
 
   
 0.684
ACI18973.1
NADP-reducing hydrogenase, subunit b.
 
     0.670
Your Current Organism:
Dictyoglomus thermophilum
NCBI taxonomy Id: 309799
Other names: D. thermophilum H-6-12, Dictyoglomus thermophilum H-6-12
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