STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI19495.1ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005. (228 aa)    
Predicted Functional Partners:
ACI19335.1
Transcriptional regulator, GntR family; Identified by match to protein family HMM PF00392.
 
  
 0.944
ACI19805.1
ABC-type transporter, ATPase component; Identified by match to protein family HMM PF00005.
 
  
0.773
ACI18541.1
ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
  
  
 0.755
ACI18315.1
Membrane protein, putative.
       0.746
ACI19683.1
Alcohol dehydrogenase; Identified by match to protein family HMM PF00107; match to protein family HMM PF08240.
  
   0.605
ACI18281.1
Membrane protein, putative.
  
 
 0.544
ACI19014.1
Beta-mannanase; Identified by match to protein family HMM PF02156; Belongs to the glycosyl hydrolase 26 family.
       0.539
ACI19111.1
Endoglucanase; Identified by match to protein family HMM PF01670; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
       0.402
Your Current Organism:
Dictyoglomus thermophilum
NCBI taxonomy Id: 309799
Other names: D. thermophilum H-6-12, Dictyoglomus thermophilum H-6-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.