STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI19356.1Hypothetical conserved protein; Identified by match to protein family HMM PF02321. (343 aa)    
Predicted Functional Partners:
ACI18586.1
Outer membrane efflux protein; Identified by match to protein family HMM PF02321.
 
  
  0.990
ACI19086.1
Secretion protein HlyD; Identified by match to protein family HMM PF00529; match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.967
ACI19280.1
Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730.
 
 
 0.870
ACI19596.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
  
 
 0.850
ACI19230.1
ABC transporter, permease protein; Identified by match to protein family HMM PF02687.
  
 
 0.839
ACI19943.1
Bacterial type II and III secretion system protein; Identified by match to protein family HMM PF00263; match to protein family HMM PF03958; match to protein family HMM PF07660; Belongs to the bacterial secretin family.
  
  
 0.708
ACI19054.1
Hypothetical protein; Identified by glimmer; putative.
       0.701
ACI19374.1
Surface antigen, putative; Identified by match to protein family HMM PF01103; match to protein family HMM PF07244.
 
   
 0.699
ACI19980.1
Conserved hypothetical protein; Identified by match to protein family HMM PF04357.
 
     0.687
ACI18485.1
Outer membrane protein OmpH; Identified by match to protein family HMM PF03938.
 
     0.674
Your Current Organism:
Dictyoglomus thermophilum
NCBI taxonomy Id: 309799
Other names: D. thermophilum H-6-12, Dictyoglomus thermophilum H-6-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.