STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI18763.1NADH-dependent butanol dehydrogenase a; Identified by match to protein family HMM PF00465. (385 aa)    
Predicted Functional Partners:
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
    0.925
ACI19615.1
Ggdef domain; Identified by match to protein family HMM PF00532; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF01966; match to protein family HMM TIGR00254.
   
   0.703
ACI19953.1
Response regulator; Identified by match to protein family HMM PF00532; match to protein family HMM PF00990; match to protein family HMM TIGR00254.
   
   0.615
ilvD
Dihydroxy-acid dehydratase; Identified by match to protein family HMM PF00920; match to protein family HMM TIGR00110; Belongs to the IlvD/Edd family.
     
 0.612
ACI18672.1
Probable methylcobalamin:homocysteine methyltransferase, putative; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.
       0.532
ACI19977.1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Identified by match to protein family HMM PF01717; match to protein family HMM PF08267.
       0.532
ACI18892.1
3-dehydroquinate synthase; Identified by match to protein family HMM PF01761.
     
 0.509
Your Current Organism:
Dictyoglomus thermophilum
NCBI taxonomy Id: 309799
Other names: D. thermophilum H-6-12, Dictyoglomus thermophilum H-6-12
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