STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI18724.1Putative C4-dicarboxylate transporter, small permease protein; Identified by match to protein family HMM PF04290. (163 aa)    
Predicted Functional Partners:
ACI19801.1
C4-dicarboxylate transporter large subunit; Identified by match to protein family HMM PF03600; match to protein family HMM PF06808; match to protein family HMM TIGR00786.
 
 0.998
ACI19549.1
Putative C4-dicarboxylate transporter, periplasmic C4-dicarboxylate-binding protein; Identified by match to protein family HMM PF03480; match to protein family HMM TIGR00787.
 
 
 0.994
ACI19102.1
Trap dicarboxylate transporter, dctp subunit, putative; Identified by match to protein family HMM PF03480.
 
  
 0.871
ACI19920.1
Versicolorin reductase; Identified by match to protein family HMM PF00106; match to protein family HMM PF08659.
  
    0.758
ACI18801.1
Conserved hypothetical protein.
  
     0.548
ACI18536.1
Identified by match to protein family HMM PF03401.
  
     0.539
ACI19066.1
Nitric oxide reductase; Identified by match to protein family HMM PF00753.
       0.464
ACI19919.1
Tricarboxylate transport membrane protein RctA; Identified by match to protein family HMM PF01970.
  
    0.418
ACI18487.1
D-3-phosphoglycerate dehydrogenase; Identified by match to protein family HMM PF00389; match to protein family HMM PF02826; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.416
ACI18455.1
Transcriptional regulator; Identified by match to protein family HMM PF01380; match to protein family HMM PF01418.
       0.406
Your Current Organism:
Dictyoglomus thermophilum
NCBI taxonomy Id: 309799
Other names: D. thermophilum H-6-12, Dictyoglomus thermophilum H-6-12
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