STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACI19124.1ABC-2 type transporter; Identified by match to protein family HMM PF01061. (260 aa)    
Predicted Functional Partners:
ACI19240.1
ABC transporter, ATP binding protein; Identified by match to protein family HMM PF00005; match to protein family HMM TIGR01188.
 
    0.954
ACI18952.1
Transcriptional regulator, AbrB family; Identified by match to protein family HMM PF04014; match to protein family HMM TIGR01439.
       0.780
ACI20081.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
    0.724
ACI19947.1
ABC-2 type transporter superfamily; Identified by match to protein family HMM PF01061.
  
  
  0.558
ACI19158.1
ABC-2 type transporter family; Identified by match to protein family HMM PF01061.
  
  
 
0.540
ACI19463.1
3-beta hydroxysteroid dehydrogenase/isomerase family; Identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF04321; match to protein family HMM PF07993.
  
    0.521
ACI20034.1
Transcriptional regulator, TetR family protein; Identified by match to protein family HMM PF00440.
       0.518
ACI18631.1
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein; Identified by match to protein family HMM PF00496.
  
  
  0.508
ACI19719.1
ABC-type multidrug transport system, ATPase component.
 
    0.499
ACI18268.1
ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.
 
    0.497
Your Current Organism:
Dictyoglomus thermophilum
NCBI taxonomy Id: 309799
Other names: D. thermophilum H-6-12, Dictyoglomus thermophilum H-6-12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.