STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arsB1Transport protein (probable substrate arsenite/antimonite). (618 aa)    
Predicted Functional Partners:
kef1
Kef-type transport system (probable substrate potassium).
  
  
 0.956
mrpA
Mrp-type sodium/proton antiporter system subunit A.
  
  
 0.766
kef2
Kef-type transport system (probable substrate potassium).
  
  
 0.643
ashA
Archaea-specific helicase AshA.
       0.579
mrpE
Mrp-type sodium/proton antiporter system subunit E.
     
 0.500
cat1
Transport protein (probable substrate cationic amino acids).
  
  
 0.455
cat2
Transport protein (probable substrate cationic amino acids).
  
  
 0.455
HVO_0280
Uncharacterized protein.
       0.452
HVO_0280A
Small CPxCG-related zinc finger protein.
       0.452
HVO_1365
Rhodanese domain protein / beta-lactamase domain protein.
       0.440
Your Current Organism:
Haloferax volcanii
NCBI taxonomy Id: 309800
Other names: H. volcanii DS2, Haloferax volcanii ATCC 29605, Haloferax volcanii DS2, Haloferax volcanii DSM 3757, Haloferax volcanii str. DS2, Haloferax volcanii strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.