Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HVO_0458A | HVO_0460 | HVO_0458A | HVO_0460 | Uncharacterized protein. | Uncharacterized protein. | 0.550 |
HVO_0458A | cydA | HVO_0458A | HVO_0462 | Uncharacterized protein. | Cytochrome bd ubiquinol oxidase subunit I. | 0.468 |
HVO_0458A | cydB | HVO_0458A | HVO_0461 | Uncharacterized protein. | Cytochrome bd ubiquinol oxidase subunit II. | 0.468 |
HVO_0458A | ridA1 | HVO_0458A | HVO_0459 | Uncharacterized protein. | Enamine/imine deaminase. | 0.773 |
HVO_0460 | HVO_0458A | HVO_0460 | HVO_0458A | Uncharacterized protein. | Uncharacterized protein. | 0.550 |
HVO_0460 | cydA | HVO_0460 | HVO_0462 | Uncharacterized protein. | Cytochrome bd ubiquinol oxidase subunit I. | 0.648 |
HVO_0460 | cydB | HVO_0460 | HVO_0461 | Uncharacterized protein. | Cytochrome bd ubiquinol oxidase subunit II. | 0.648 |
HVO_0460 | ridA1 | HVO_0460 | HVO_0459 | Uncharacterized protein. | Enamine/imine deaminase. | 0.550 |
cydA | HVO_0458A | HVO_0462 | HVO_0458A | Cytochrome bd ubiquinol oxidase subunit I. | Uncharacterized protein. | 0.468 |
cydA | HVO_0460 | HVO_0462 | HVO_0460 | Cytochrome bd ubiquinol oxidase subunit I. | Uncharacterized protein. | 0.648 |
cydA | cydB | HVO_0462 | HVO_0461 | Cytochrome bd ubiquinol oxidase subunit I. | Cytochrome bd ubiquinol oxidase subunit II. | 0.999 |
cydA | ridA1 | HVO_0462 | HVO_0459 | Cytochrome bd ubiquinol oxidase subunit I. | Enamine/imine deaminase. | 0.488 |
cydB | HVO_0458A | HVO_0461 | HVO_0458A | Cytochrome bd ubiquinol oxidase subunit II. | Uncharacterized protein. | 0.468 |
cydB | HVO_0460 | HVO_0461 | HVO_0460 | Cytochrome bd ubiquinol oxidase subunit II. | Uncharacterized protein. | 0.648 |
cydB | cydA | HVO_0461 | HVO_0462 | Cytochrome bd ubiquinol oxidase subunit II. | Cytochrome bd ubiquinol oxidase subunit I. | 0.999 |
cydB | ridA1 | HVO_0461 | HVO_0459 | Cytochrome bd ubiquinol oxidase subunit II. | Enamine/imine deaminase. | 0.482 |
ridA1 | HVO_0458A | HVO_0459 | HVO_0458A | Enamine/imine deaminase. | Uncharacterized protein. | 0.773 |
ridA1 | HVO_0460 | HVO_0459 | HVO_0460 | Enamine/imine deaminase. | Uncharacterized protein. | 0.550 |
ridA1 | cydA | HVO_0459 | HVO_0462 | Enamine/imine deaminase. | Cytochrome bd ubiquinol oxidase subunit I. | 0.488 |
ridA1 | cydB | HVO_0459 | HVO_0461 | Enamine/imine deaminase. | Cytochrome bd ubiquinol oxidase subunit II. | 0.482 |