STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malGABC-type transport system permease protein (probable substrate maltose). (358 aa)    
Predicted Functional Partners:
malF
ABC-type transport system permease protein (probable substrate maltose).
 0.999
malE
ABC-type transport system periplasmic substrate-binding protein (probable substrate maltose).
 
 0.999
malK
ABC-type transport system ATP-binding protein (probable substrate maltose).
 
  
 0.990
tsgB2
ABC-type transport system permease protein (probable substrate sugar).
 
 0.979
tsgD3
ABC-type transport system ATP-binding protein (probable substrate sugar).
 
  
 0.965
tsgB3
ABC-type transport system permease protein (probable substrate sugar).
 
 0.962
tsgB1
ABC-type transport system permease protein (probable substrate sugar).
 
 
 0.960
tsgD1
ABC-type transport system ATP-binding protein (probable substrate sugar).
 
  
  0.931
tsgD2
ABC-type transport system ATP-binding protein (probable substrate sugar).
 
  
  0.911
amyA1
Glycoside hydrolase family protein.
  
 0.713
Your Current Organism:
Haloferax volcanii
NCBI taxonomy Id: 309800
Other names: H. volcanii DS2, Haloferax volcanii ATCC 29605, Haloferax volcanii DS2, Haloferax volcanii DSM 3757, Haloferax volcanii str. DS2, Haloferax volcanii strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.