Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HVO_0727 | HVO_0740 | HVO_0727 | HVO_0740 | Rhomboid family protein. | DUF82 family protein. | 0.527 |
HVO_0727 | HVO_0742 | HVO_0727 | HVO_0742 | Rhomboid family protein. | Uncharacterized protein. | 0.459 |
HVO_0727 | polX | HVO_0727 | HVO_0741 | Rhomboid family protein. | DNA-directed DNA polymerase X. | 0.548 |
HVO_0740 | HVO_0727 | HVO_0740 | HVO_0727 | DUF82 family protein. | Rhomboid family protein. | 0.527 |
HVO_0740 | HVO_0742 | HVO_0740 | HVO_0742 | DUF82 family protein. | Uncharacterized protein. | 0.800 |
HVO_0740 | HVO_0743 | HVO_0740 | HVO_0743 | DUF82 family protein. | Putative phosphodiesterase. | 0.451 |
HVO_0740 | polX | HVO_0740 | HVO_0741 | DUF82 family protein. | DNA-directed DNA polymerase X. | 0.800 |
HVO_0742 | HVO_0727 | HVO_0742 | HVO_0727 | Uncharacterized protein. | Rhomboid family protein. | 0.459 |
HVO_0742 | HVO_0740 | HVO_0742 | HVO_0740 | Uncharacterized protein. | DUF82 family protein. | 0.800 |
HVO_0742 | HVO_0743 | HVO_0742 | HVO_0743 | Uncharacterized protein. | Putative phosphodiesterase. | 0.461 |
HVO_0742 | polX | HVO_0742 | HVO_0741 | Uncharacterized protein. | DNA-directed DNA polymerase X. | 0.800 |
HVO_0743 | HVO_0740 | HVO_0743 | HVO_0740 | Putative phosphodiesterase. | DUF82 family protein. | 0.451 |
HVO_0743 | HVO_0742 | HVO_0743 | HVO_0742 | Putative phosphodiesterase. | Uncharacterized protein. | 0.461 |
HVO_0743 | polX | HVO_0743 | HVO_0741 | Putative phosphodiesterase. | DNA-directed DNA polymerase X. | 0.452 |
polX | HVO_0727 | HVO_0741 | HVO_0727 | DNA-directed DNA polymerase X. | Rhomboid family protein. | 0.548 |
polX | HVO_0740 | HVO_0741 | HVO_0740 | DNA-directed DNA polymerase X. | DUF82 family protein. | 0.800 |
polX | HVO_0742 | HVO_0741 | HVO_0742 | DNA-directed DNA polymerase X. | Uncharacterized protein. | 0.800 |
polX | HVO_0743 | HVO_0741 | HVO_0743 | DNA-directed DNA polymerase X. | Putative phosphodiesterase. | 0.452 |