STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HVO_0771Beta-lactamase domain protein. (262 aa)    
Predicted Functional Partners:
HVO_0770
Uncharacterized protein.
  
    0.633
HVO_2345
Flavin-dependent pyridine nucleotide oxidoreductase.
 
 
 0.594
HVO_0772
NP_1176A family transcription regulator.
       0.591
HVO_1365
Rhodanese domain protein / beta-lactamase domain protein.
 
 
 0.556
HVO_2772
Rhodanese domain protein / beta-lactamase domain protein.
 
 
 0.527
HVO_0105
FAD-dependent oxidoreductase.
 
 
 0.522
HVO_0769
TRAM domain protein.
       0.458
truA
tRNA pseudouridine synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family.
   
 
 0.439
arsC
Arsenate reductase (glutaredoxin).
   
   0.434
HVO_0773
Putative S-adenosylmethionine-dependent methyltransferase.
  
   0.408
Your Current Organism:
Haloferax volcanii
NCBI taxonomy Id: 309800
Other names: H. volcanii DS2, Haloferax volcanii ATCC 29605, Haloferax volcanii DS2, Haloferax volcanii DSM 3757, Haloferax volcanii str. DS2, Haloferax volcanii strain DS2
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