STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cynTCarbonic anhydrase. (231 aa)    
Predicted Functional Partners:
HVO_2593
Cationic amino acid transporter.
  
  
 0.933
HVO_2410
UPF0753 family protein; Belongs to the UPF0753 family.
  
    0.755
HVO_0953
DUF304 domain protein; Overlaps another CDS with the same product name.
       0.709
HVO_0954
DUF304 domain protein; Overlaps another CDS with the same product name.
       0.709
HVO_0956
Metallophosphoesterase domain protein.
       0.531
HVO_0955
Uncharacterized protein.
       0.510
HVO_0957
Uncharacterized protein.
       0.510
nasA
Assimilatory nitrate reductase.
 
    0.507
apt2
Purine phosphoribosyltransferase (adenine phosphoribosyltransferase, xanthine-guanine phosphoribosyltransferase).
   
    0.487
apt1
HGPRTase-like protein 1; May catalyze a purine salvage reaction, the substrate is unknown.
   
    0.487
Your Current Organism:
Haloferax volcanii
NCBI taxonomy Id: 309800
Other names: H. volcanii DS2, Haloferax volcanii ATCC 29605, Haloferax volcanii DS2, Haloferax volcanii DSM 3757, Haloferax volcanii str. DS2, Haloferax volcanii strain DS2
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