Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| HVO_1093 | nuoCD1 | HVO_1093 | HVO_0980 | Putative S-adenosylmethionine-dependent methyltransferase. | NADH dehydrogenase-like complex subunit CD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity); In the N-terminal section; belongs to the complex I 30 kDa subunit family. | 0.835 |
| HVO_1093 | nuoCD2 | HVO_1093 | HVO_0968 | Putative S-adenosylmethionine-dependent methyltransferase. | NADH dehydrogenase-like complex subunit CD. | 0.835 |
| HVO_1093 | psmA1 | HVO_1093 | HVO_1091 | Putative S-adenosylmethionine-dependent methyltransferase. | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The H.volcanii alpha1-beta proteasome is able to cleave oligopeptides after Phe, Tyr and Trp, poorly after Glu but not after Arg. Thus, displays chymotrypsin-like activity, low caspase-like activity but no trypsin- like activity; Belongs to the peptidase T1A family. | 0.899 |
| HVO_1093 | rnp2 | HVO_1093 | HVO_1092 | Putative S-adenosylmethionine-dependent methyltransferase. | Ribonuclease P protein component 2; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 2 family. | 0.805 |
| HVO_1093 | rnp3 | HVO_1093 | HVO_1094 | Putative S-adenosylmethionine-dependent methyltransferase. | Ribonuclease P protein component 3; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. | 0.872 |
| HVO_1093 | rps1e | HVO_1093 | HVO_1145 | Putative S-adenosylmethionine-dependent methyltransferase. | 30S ribosomal protein S1e; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.624 |
| HVO_1093 | rps24e | HVO_1093 | HVO_1896 | Putative S-adenosylmethionine-dependent methyltransferase. | 30S ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family. | 0.624 |
| HVO_1093 | rps4e | HVO_1093 | HVO_2552 | Putative S-adenosylmethionine-dependent methyltransferase. | 30S ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.620 |
| HVO_1093 | rps5 | HVO_1093 | HVO_2544 | Putative S-adenosylmethionine-dependent methyltransferase. | 30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy. | 0.683 |
| HVO_1093 | rps6e | HVO_1093 | HVO_1827 | Putative S-adenosylmethionine-dependent methyltransferase. | 30S ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.618 |
| nuoCD1 | HVO_1093 | HVO_0980 | HVO_1093 | NADH dehydrogenase-like complex subunit CD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity); In the N-terminal section; belongs to the complex I 30 kDa subunit family. | Putative S-adenosylmethionine-dependent methyltransferase. | 0.835 |
| nuoCD1 | nuoCD2 | HVO_0980 | HVO_0968 | NADH dehydrogenase-like complex subunit CD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity); In the N-terminal section; belongs to the complex I 30 kDa subunit family. | NADH dehydrogenase-like complex subunit CD. | 0.999 |
| nuoCD2 | HVO_1093 | HVO_0968 | HVO_1093 | NADH dehydrogenase-like complex subunit CD. | Putative S-adenosylmethionine-dependent methyltransferase. | 0.835 |
| nuoCD2 | nuoCD1 | HVO_0968 | HVO_0980 | NADH dehydrogenase-like complex subunit CD. | NADH dehydrogenase-like complex subunit CD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient (By similarity); In the N-terminal section; belongs to the complex I 30 kDa subunit family. | 0.999 |
| psmA1 | HVO_1093 | HVO_1091 | HVO_1093 | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The H.volcanii alpha1-beta proteasome is able to cleave oligopeptides after Phe, Tyr and Trp, poorly after Glu but not after Arg. Thus, displays chymotrypsin-like activity, low caspase-like activity but no trypsin- like activity; Belongs to the peptidase T1A family. | Putative S-adenosylmethionine-dependent methyltransferase. | 0.899 |
| psmA1 | rnp2 | HVO_1091 | HVO_1092 | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The H.volcanii alpha1-beta proteasome is able to cleave oligopeptides after Phe, Tyr and Trp, poorly after Glu but not after Arg. Thus, displays chymotrypsin-like activity, low caspase-like activity but no trypsin- like activity; Belongs to the peptidase T1A family. | Ribonuclease P protein component 2; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 2 family. | 0.805 |
| psmA1 | rnp3 | HVO_1091 | HVO_1094 | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The H.volcanii alpha1-beta proteasome is able to cleave oligopeptides after Phe, Tyr and Trp, poorly after Glu but not after Arg. Thus, displays chymotrypsin-like activity, low caspase-like activity but no trypsin- like activity; Belongs to the peptidase T1A family. | Ribonuclease P protein component 3; Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends; Belongs to the eukaryotic/archaeal RNase P protein component 3 family. | 0.808 |
| psmA1 | rps1e | HVO_1091 | HVO_1145 | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The H.volcanii alpha1-beta proteasome is able to cleave oligopeptides after Phe, Tyr and Trp, poorly after Glu but not after Arg. Thus, displays chymotrypsin-like activity, low caspase-like activity but no trypsin- like activity; Belongs to the peptidase T1A family. | 30S ribosomal protein S1e; Belongs to the eukaryotic ribosomal protein eS1 family. | 0.651 |
| psmA1 | rps4e | HVO_1091 | HVO_2552 | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The H.volcanii alpha1-beta proteasome is able to cleave oligopeptides after Phe, Tyr and Trp, poorly after Glu but not after Arg. Thus, displays chymotrypsin-like activity, low caspase-like activity but no trypsin- like activity; Belongs to the peptidase T1A family. | 30S ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.719 |
| psmA1 | rps5 | HVO_1091 | HVO_2544 | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. The H.volcanii alpha1-beta proteasome is able to cleave oligopeptides after Phe, Tyr and Trp, poorly after Glu but not after Arg. Thus, displays chymotrypsin-like activity, low caspase-like activity but no trypsin- like activity; Belongs to the peptidase T1A family. | 30S ribosomal protein S5; With S4 and S12 plays an important role in translational accuracy. | 0.469 |
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