STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HVO_1294GMC family oxidoreductase. (526 aa)    
Predicted Functional Partners:
HVO_0112
Tetratricopeptide repeat protein.
    
 0.939
HVO_1293
Uncharacterized protein.
       0.800
aldH2
Aldehyde dehydrogenase.
  
  
 0.663
HVO_1291
Fumarylacetoacetase family protein.
  
  
 0.644
gdh
Glucose 1-dehydrogenase; Catalyzes the NAD(P)(+)-dependent oxidation of D-glucose to D-gluconate via gluconolactone. Can utilize both NAD(+) and NADP(+) as electron acceptor. Is involved in the degradation of glucose through a modified Entner-Doudoroff pathway.
  
  
 0.643
HVO_1292
DUF1648 family protein.
       0.636
uraA3
Xanthine/uracil permease family transport protein.
  
 
 0.625
agsA
Putative archaetidylglycerolphosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
  
    0.544
qor1
NADPH:quinone reductase.
     
 0.543
hisC
Histidinol-phosphate aminotransferase.
       0.536
Your Current Organism:
Haloferax volcanii
NCBI taxonomy Id: 309800
Other names: H. volcanii DS2, Haloferax volcanii ATCC 29605, Haloferax volcanii DS2, Haloferax volcanii DSM 3757, Haloferax volcanii str. DS2, Haloferax volcanii strain DS2
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