STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcemethylmalonyl-CoA epimerase; Aldoketomutase; glyoxalase. (127 aa)    
Predicted Functional Partners:
mmcB
methylmalonyl-CoA mutase subunit B (cobalamin-binding subunit).
  
 0.991
mmcA2
methylmalonyl-CoA mutase subunit A.
 
  
 0.962
mmcA1
methylmalonyl-CoA mutase subunit A.
 
  
 0.957
pccB2
propionyl-CoA carboxylase carboxyltransferase component.
 
 
 0.947
bccA
propionyl-CoA carboxylase biotin carboxylase component.
  
 
 0.916
HVO_2472
Uncharacterized protein.
     
  0.900
nuoI
NADH dehydrogenase-like complex subunit I.
  
  
 0.660
ygfD
YgfD family GTPase.
 
  
 0.620
HVO_1377
UPF0145 family protein; Belongs to the UPF0145 family.
       0.563
HVO_1378
Uncharacterized protein.
       0.559
Your Current Organism:
Haloferax volcanii
NCBI taxonomy Id: 309800
Other names: H. volcanii DS2, Haloferax volcanii ATCC 29605, Haloferax volcanii DS2, Haloferax volcanii DSM 3757, Haloferax volcanii str. DS2, Haloferax volcanii strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.