Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ilvA1 | ilvB1 | HVO_0464 | HVO_1508 | Threonine ammonia-lyase. | Acetolactate synthase large subunit. | 0.975 |
ilvA1 | ilvC | HVO_0464 | HVO_1506 | Threonine ammonia-lyase. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.798 |
ilvA1 | ilvD | HVO_0464 | HVO_2646 | Threonine ammonia-lyase. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.982 |
ilvA1 | ilvN | HVO_0464 | HVO_1507 | Threonine ammonia-lyase. | Acetolactate synthase small subunit. | 0.987 |
ilvA1 | leuB | HVO_0464 | HVO_1502 | Threonine ammonia-lyase. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.965 |
ilvA1 | leuC1 | HVO_0464 | HVO_1504 | Threonine ammonia-lyase. | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.700 |
ilvA1 | leuD1 | HVO_0464 | HVO_1503 | Threonine ammonia-lyase. | 3-isopropylmalate dehydratase small subunit. | 0.734 |
ilvA1 | thrC3 | HVO_0464 | HVO_2969 | Threonine ammonia-lyase. | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.957 |
ilvB1 | ilvA1 | HVO_1508 | HVO_0464 | Acetolactate synthase large subunit. | Threonine ammonia-lyase. | 0.975 |
ilvB1 | ilvC | HVO_1508 | HVO_1506 | Acetolactate synthase large subunit. | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | 0.999 |
ilvB1 | ilvD | HVO_1508 | HVO_2646 | Acetolactate synthase large subunit. | Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. | 0.990 |
ilvB1 | ilvN | HVO_1508 | HVO_1507 | Acetolactate synthase large subunit. | Acetolactate synthase small subunit. | 0.999 |
ilvB1 | leuA1 | HVO_1508 | HVO_0644 | Acetolactate synthase large subunit. | 2-isopropylmalate synthase / (R)-citramalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.986 |
ilvB1 | leuA2 | HVO_1508 | HVO_1510 | Acetolactate synthase large subunit. | 2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family. | 0.961 |
ilvB1 | leuB | HVO_1508 | HVO_1502 | Acetolactate synthase large subunit. | 3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate. | 0.995 |
ilvB1 | leuC1 | HVO_1508 | HVO_1504 | Acetolactate synthase large subunit. | 3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. | 0.946 |
ilvB1 | leuD1 | HVO_1508 | HVO_1503 | Acetolactate synthase large subunit. | 3-isopropylmalate dehydratase small subunit. | 0.955 |
ilvB1 | thrC3 | HVO_1508 | HVO_2969 | Acetolactate synthase large subunit. | Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. | 0.717 |
ilvC | ilvA1 | HVO_1506 | HVO_0464 | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | Threonine ammonia-lyase. | 0.798 |
ilvC | ilvB1 | HVO_1506 | HVO_1508 | Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate. | Acetolactate synthase large subunit. | 0.999 |
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