STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
agl7Low-salt glycan biosynthesis sulfotransferase Agl7; Involved in N-glycan biosynthetic pathway that takes place under low-salt conditions (1.75 M instead of 3.4 M). Participates in the formation of the tetrasaccharide present at 'Asn-532' of S-layer glycoprotein Csg, consisting of a sulfated hexose, 2 hexoses and rhamnose. Mediates sulfation of sugar 1 in the tetrasaccharide. (405 aa)    
Predicted Functional Partners:
agl9
Low-salt glycan biosynthesis hexosyltransferase Agl9; Hexosyltransferase involved in N-glycan biosynthetic pathway that takes place under low-salt conditions (1.75 M instead of 3.4 M). Participates in the formation of the tetrasaccharide present at 'Asn- 532' of S-layer glycoprotein Csg, consisting of a sulfated hexose, 2 hexoses and rhamnose. Involved in the addition of sugar 3 to the disaccharide-charged dolichol phosphate in the tetrasaccharide. Belongs to the glycosyltransferase group 1 family.
 
  
 0.803
agl10
Low-salt glycan biosynthesis hexosyltransferase Agl10; Hexosyltransferase involved in N-glycan biosynthetic pathway that takes place under low-salt conditions (1.75 M instead of 3.4 M). Participates in the formation of the tetrasaccharide present at 'Asn- 532' of S-layer glycoprotein Csg, consisting of a sulfated hexose, 2 hexoses and rhamnose. Involved in the addition of final rhamnose (sugar 4) of the tetrasaccharide on the dolichol phosphate carrier. Belongs to the glycosyltransferase 2 family.
     
 0.748
argF
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
   
  
 0.736
HVO_2916
Putative oxidoreductase (short-chain dehydrogenase family).
  
 
 0.693
HVO_2468
Putative oxidoreductase (short-chain dehydrogenase family).
  
 
 0.683
HVO_1311
Putative oxidoreductase (short-chain dehydrogenase family).
  
 
 0.680
HVO_2504
Putative oxidoreductase (short-chain dehydrogenase family); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.680
HVO_0296
Putative oxidoreductase (short-chain dehydrogenase family).
  
 
 0.679
HVO_2529
Putative oxidoreductase (short-chain dehydrogenase family).
  
 
 0.678
HVO_1028
Putative oxidoreductase (short-chain dehydrogenase family).
  
 
 0.675
Your Current Organism:
Haloferax volcanii
NCBI taxonomy Id: 309800
Other names: H. volcanii DS2, Haloferax volcanii ATCC 29605, Haloferax volcanii DS2, Haloferax volcanii DSM 3757, Haloferax volcanii str. DS2, Haloferax volcanii strain DS2
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