Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HVO_2319 | HVO_2320 | HVO_2319 | HVO_2320 | DUF92 family protein. | GNAT family acetyltransferase. | 0.800 |
HVO_2319 | ferA1 | HVO_2319 | HVO_1246 | DUF92 family protein. | Ferredoxin (2Fe-2S). | 0.435 |
HVO_2319 | scpA | HVO_2319 | HVO_0690 | DUF92 family protein. | Chromosome segregation and condensation protein ScpA. | 0.402 |
HVO_2319 | uppS2 | HVO_2319 | HVO_2318 | DUF92 family protein. | Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific). | 0.695 |
HVO_2320 | HVO_2319 | HVO_2320 | HVO_2319 | GNAT family acetyltransferase. | DUF92 family protein. | 0.800 |
HVO_2320 | uppS2 | HVO_2320 | HVO_2318 | GNAT family acetyltransferase. | Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific). | 0.591 |
ferA1 | HVO_2319 | HVO_1246 | HVO_2319 | Ferredoxin (2Fe-2S). | DUF92 family protein. | 0.435 |
scpA | HVO_2319 | HVO_0690 | HVO_2319 | Chromosome segregation and condensation protein ScpA. | DUF92 family protein. | 0.402 |
scpA | uppS2 | HVO_0690 | HVO_2318 | Chromosome segregation and condensation protein ScpA. | Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific). | 0.402 |
uppS2 | HVO_2319 | HVO_2318 | HVO_2319 | Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific). | DUF92 family protein. | 0.695 |
uppS2 | HVO_2320 | HVO_2318 | HVO_2320 | Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific). | GNAT family acetyltransferase. | 0.591 |
uppS2 | scpA | HVO_2318 | HVO_0690 | Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific). | Chromosome segregation and condensation protein ScpA. | 0.402 |