STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HVO_2815AXerC/D-like integrase. (384 aa)    
Predicted Functional Partners:
speE
Polyamine aminopropyltransferase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
  
   
 0.720
HVO_0744
Homolog to carboxylate-amine ligase.
  
     0.689
HVO_1686
Major facilitator superfamily transport protein.
  
     0.563
HVO_0270
Uncharacterized protein.
      
 0.548
hcpB
Halocyanin.
      
 0.544
HVO_2434
IS1341-type transposase ISHvo17.
  
    0.493
HVO_0126
Uncharacterized protein.
  
     0.491
HVO_0566
Glycoside transferase domain protein.
  
     0.490
HVO_2019
PRC domain protein.
      
 0.459
HVO_2020
DUF502 family protein.
      
 0.459
Your Current Organism:
Haloferax volcanii
NCBI taxonomy Id: 309800
Other names: H. volcanii DS2, Haloferax volcanii ATCC 29605, Haloferax volcanii DS2, Haloferax volcanii DSM 3757, Haloferax volcanii str. DS2, Haloferax volcanii strain DS2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.