trd_0272 protein (Thermomicrobium roseum) - STRING interaction network

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Score

trd_0272

Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005. (245 aa)

Predicted Functional Partners:

trd_0273

0.984

trd_0220

0.784

trd_0274

0.768

trd_0275

0.746

trd_1576

0.667

trd_1577

0.667

trd_0013

0.637

trd_0639

0.632

trd_0271

0.631

trd_1860

0.567

Your Current Organism:

Thermomicrobium roseum

NCBI taxonomy Id: 309801
Other names: T. roseum DSM 5159, Thermomicrobium roseum DSM 5159

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
trd_0013	trd_0272	Probable transport ATP-binding protein; Identified by match to protein family HMM PF00005.	Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.	0.637
trd_0220	trd_0272	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.	0.784
trd_0271	trd_0272	Hypothetical protein; Identified by glimmer; putative.	Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.	0.631
trd_0271	trd_0273	Hypothetical protein; Identified by glimmer; putative.	Putative ABC transport system integral membrane protein; Identified by match to protein family HMM PF02687.	0.631
trd_0271	trd_0274	Hypothetical protein; Identified by glimmer; putative.	Putative membrane protein; Identified by match to protein family HMM PF07907.	0.626
trd_0271	trd_0275	Hypothetical protein; Identified by glimmer; putative.	methylated-DNA-[protein]-cysteine S-methyltransferase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.610
trd_0272	trd_0013	Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.	Probable transport ATP-binding protein; Identified by match to protein family HMM PF00005.	0.637
trd_0272	trd_0220	Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.	Efflux transporter, RND family, MFP subunit; Identified by match to protein family HMM TIGR01730; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.	0.784
trd_0272	trd_0271	Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.	Hypothetical protein; Identified by glimmer; putative.	0.631
trd_0272	trd_0273	Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.	Putative ABC transport system integral membrane protein; Identified by match to protein family HMM PF02687.	0.984
trd_0272	trd_0274	Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.	Putative membrane protein; Identified by match to protein family HMM PF07907.	0.768
trd_0272	trd_0275	Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.	methylated-DNA-[protein]-cysteine S-methyltransferase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.746
trd_0272	trd_0639	Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.	histidyl-tRNA synthetase; Identified by match to protein family HMM PF00587.	0.632
trd_0272	trd_1576	Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.	Putative lipoprotein.	0.667
trd_0272	trd_1577	Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.	Putative lipoprotein.	0.667
trd_0272	trd_1860	Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.	Inner membrane ABC transporter permease protein yddQ; Identified by match to protein family HMM PF00528.	0.567
trd_0273	trd_0271	Putative ABC transport system integral membrane protein; Identified by match to protein family HMM PF02687.	Hypothetical protein; Identified by glimmer; putative.	0.631
trd_0273	trd_0272	Putative ABC transport system integral membrane protein; Identified by match to protein family HMM PF02687.	Macrolide-specific ABC-type efflux carrier; Identified by match to protein family HMM PF00005.	0.984
trd_0273	trd_0274	Putative ABC transport system integral membrane protein; Identified by match to protein family HMM PF02687.	Putative membrane protein; Identified by match to protein family HMM PF07907.	0.768
trd_0273	trd_0275	Putative ABC transport system integral membrane protein; Identified by match to protein family HMM PF02687.	methylated-DNA-[protein]-cysteine S-methyltransferase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.746