trd_0322 protein (Thermomicrobium roseum) - STRING interaction network

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Score

trd_0322

Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211. (331 aa)

Predicted Functional Partners:

trd_1390

0.918

trd_0906

0.917

trd_1389

0.915

trd_1396

0.904

trd_1850

0.901

trd_0904

0.689

trd_1387

0.682

trd_1388

0.633

trd_0323

0.574

trd_0324

0.574

Your Current Organism:

Thermomicrobium roseum

NCBI taxonomy Id: 309801
Other names: T. roseum DSM 5159, Thermomicrobium roseum DSM 5159

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
trd_0322	trd_0323	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	Pyoverdin chromophore biosynthetic protein pvcC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03241.	0.574
trd_0322	trd_0324	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	Pyoverdin chromophore biosynthetic protein pvcC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.574
trd_0322	trd_0904	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	Identified by match to protein family HMM PF02585.	0.689
trd_0322	trd_0906	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	0.917
trd_0322	trd_1387	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	2-oxo-hepta-3-ene-1,7-dioic acid hydratase; Identified by match to protein family HMM PF01689.	0.682
trd_0322	trd_1388	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	4-oxalocrotonate decarboxylase; Identified by match to protein family HMM PF01689.	0.633
trd_0322	trd_1389	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	Putative tautomerase; Identified by match to protein family HMM PF01361; Belongs to the 4-oxalocrotonate tautomerase family.	0.915
trd_0322	trd_1390	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	Putative hydrolase, alpha/beta fold family; Identified by match to protein family HMM PF00561.	0.918
trd_0322	trd_1396	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903.	0.904
trd_0322	trd_1850	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	Identified by match to protein family HMM PF00903.	0.901
trd_0323	trd_0322	Pyoverdin chromophore biosynthetic protein pvcC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03241.	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	0.574
trd_0323	trd_0324	Pyoverdin chromophore biosynthetic protein pvcC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03241.	Pyoverdin chromophore biosynthetic protein pvcC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	0.994
trd_0324	trd_0322	Pyoverdin chromophore biosynthetic protein pvcC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	0.574
trd_0324	trd_0323	Pyoverdin chromophore biosynthetic protein pvcC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift.	Pyoverdin chromophore biosynthetic protein pvcC; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF03241.	0.994
trd_0904	trd_0322	Identified by match to protein family HMM PF02585.	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	0.689
trd_0904	trd_0906	Identified by match to protein family HMM PF02585.	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	0.918
trd_0904	trd_1396	Identified by match to protein family HMM PF02585.	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903.	0.676
trd_0906	trd_0322	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	0.917
trd_0906	trd_0904	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	Identified by match to protein family HMM PF02585.	0.918
trd_0906	trd_1387	Catechol 2,3-dioxygenase; Identified by match to protein family HMM PF00903; match to protein family HMM TIGR03211.	2-oxo-hepta-3-ene-1,7-dioic acid hydratase; Identified by match to protein family HMM PF01689.	0.597