trd_0912 protein (Thermomicrobium roseum) - STRING interaction network

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Score

trd_0912

Mannonate dehydratase; Catalyzes the dehydration of D-mannonate. (349 aa)

Predicted Functional Partners:

trd_1957

0.918

trd_0911

0.895

trd_0197

0.822

gnd

0.814

rpiA

0.800

rpe

0.800

trd_1810

0.483

trd_0913

0.461

trd_0129

0.435

trd_1942

0.431

Your Current Organism:

Thermomicrobium roseum

NCBI taxonomy Id: 309801
Other names: T. roseum DSM 5159, Thermomicrobium roseum DSM 5159

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
gnd	rpe	trd_1142	trd_0613	6-phosphogluconate dehydrogenase (decarboxylating); Identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR00872.	Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.	0.906
gnd	rpiA	trd_1142	trd_0478	6-phosphogluconate dehydrogenase (decarboxylating); Identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR00872.	Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.	0.916
gnd	trd_0912	trd_1142	trd_0912	6-phosphogluconate dehydrogenase (decarboxylating); Identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR00872.	Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.	0.814
gnd	trd_1957	trd_1142	trd_1957	6-phosphogluconate dehydrogenase (decarboxylating); Identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR00872.	Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746.	0.800
rpe	gnd	trd_0613	trd_1142	Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.	6-phosphogluconate dehydrogenase (decarboxylating); Identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR00872.	0.906
rpe	rpiA	trd_0613	trd_0478	Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.	Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.	0.947
rpe	trd_0911	trd_0613	trd_0911	Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.	Putative isomerase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01188; match to protein family HMM PF02746.	0.800
rpe	trd_0912	trd_0613	trd_0912	Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.	Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.	0.800
rpe	trd_1957	trd_0613	trd_1957	Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.	Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746.	0.800
rpiA	gnd	trd_0478	trd_1142	Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.	6-phosphogluconate dehydrogenase (decarboxylating); Identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM PF03807; match to protein family HMM TIGR00872.	0.916
rpiA	rpe	trd_0478	trd_0613	Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.	Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.	0.947
rpiA	trd_0912	trd_0478	trd_0912	Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.	Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.	0.800
rpiA	trd_1957	trd_0478	trd_1957	Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.	Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746.	0.800
trd_0129	trd_0197	trd_0129	trd_0197	GntR-family transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.	Putative aldolase; Identified by match to protein family HMM PF01081; match to protein family HMM PF01791; match to protein family HMM PF02581; match to protein family HMM TIGR01182.	0.431
trd_0129	trd_0912	trd_0129	trd_0912	GntR-family transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.	Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.	0.435
trd_0197	trd_0129	trd_0197	trd_0129	Putative aldolase; Identified by match to protein family HMM PF01081; match to protein family HMM PF01791; match to protein family HMM PF02581; match to protein family HMM TIGR01182.	GntR-family transcriptional regulator; Identified by match to protein family HMM PF00392; match to protein family HMM PF07729.	0.431
trd_0197	trd_0912	trd_0197	trd_0912	Putative aldolase; Identified by match to protein family HMM PF01081; match to protein family HMM PF01791; match to protein family HMM PF02581; match to protein family HMM TIGR01182.	Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.	0.822
trd_0911	rpe	trd_0911	trd_0613	Putative isomerase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01188; match to protein family HMM PF02746.	Ribulose-phosphate 3-epimerase; Identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; Belongs to the ribulose-phosphate 3-epimerase family.	0.800
trd_0911	trd_0912	trd_0911	trd_0912	Putative isomerase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01188; match to protein family HMM PF02746.	Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.	0.895
trd_0911	trd_1957	trd_0911	trd_1957	Putative isomerase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a frame shift; identified by match to protein family HMM PF01188; match to protein family HMM PF02746.	Mandelate racemase/muconate lactonizing enzyme:Mandelate racemase/muconate lactonizing enzyme; Identified by match to protein family HMM PF01188; match to protein family HMM PF02746.	0.858