Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ribBA | trd_1767 | trd_0504 | trd_1767 | Riboflavin biosynthesis protein ribA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | 0.484 |
| trd_0597 | trd_1767 | trd_0597 | trd_1767 | Putative pyrimidine precursor biosynthesis enzyme; Identified by match to protein family HMM PF09084. | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | 0.430 |
| trd_0902 | trd_1767 | trd_0902 | trd_1767 | Putative ABC transporter substrate-binding protein; Identified by match to protein family HMM PF09084. | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | 0.430 |
| trd_1358 | trd_1767 | trd_1358 | trd_1767 | Putative frnE protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF01323. | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | 0.457 |
| trd_1767 | ribBA | trd_1767 | trd_0504 | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | Riboflavin biosynthesis protein ribA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.484 |
| trd_1767 | trd_0597 | trd_1767 | trd_0597 | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | Putative pyrimidine precursor biosynthesis enzyme; Identified by match to protein family HMM PF09084. | 0.430 |
| trd_1767 | trd_0902 | trd_1767 | trd_0902 | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | Putative ABC transporter substrate-binding protein; Identified by match to protein family HMM PF09084. | 0.430 |
| trd_1767 | trd_1358 | trd_1767 | trd_1358 | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | Putative frnE protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop; identified by match to protein family HMM PF01323. | 0.457 |
| trd_1767 | trd_1768 | trd_1767 | trd_1768 | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | Putative Uncharacterized BCR, YitT family; COG1284; identified by match to protein family HMM PF02588. | 0.478 |
| trd_1767 | trd_1769 | trd_1767 | trd_1769 | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | Hypothetical protein; Identified by glimmer; putative. | 0.478 |
| trd_1767 | trd_1806 | trd_1767 | trd_1806 | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | 3-ketosteroid dehydrogenase; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266. | 0.774 |
| trd_1768 | trd_1767 | trd_1768 | trd_1767 | Putative Uncharacterized BCR, YitT family; COG1284; identified by match to protein family HMM PF02588. | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | 0.478 |
| trd_1768 | trd_1769 | trd_1768 | trd_1769 | Putative Uncharacterized BCR, YitT family; COG1284; identified by match to protein family HMM PF02588. | Hypothetical protein; Identified by glimmer; putative. | 0.773 |
| trd_1769 | trd_1767 | trd_1769 | trd_1767 | Hypothetical protein; Identified by glimmer; putative. | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | 0.478 |
| trd_1769 | trd_1768 | trd_1769 | trd_1768 | Hypothetical protein; Identified by glimmer; putative. | Putative Uncharacterized BCR, YitT family; COG1284; identified by match to protein family HMM PF02588. | 0.773 |
| trd_1806 | trd_1767 | trd_1806 | trd_1767 | 3-ketosteroid dehydrogenase; Identified by match to protein family HMM PF00890; match to protein family HMM PF01266. | Oxidoreductase; Identified by match to protein family HMM PF02525; match to protein family HMM PF03358. | 0.774 |