trd_1876 protein (Thermomicrobium roseum) - STRING interaction network

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trd_1876

Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop. (209 aa)

Predicted Functional Partners:

trd_1873

0.963

trd_1874

0.953

trd_1875

0.952

trd_1878

0.912

trd_1877

0.900

trd_1865

0.637

hypA

0.582

hypD

0.517

hypC

0.517

hypB

0.517

Your Current Organism:

Thermomicrobium roseum

NCBI taxonomy Id: 309801
Other names: T. roseum DSM 5159, Thermomicrobium roseum DSM 5159

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
hypA	hypB	trd_1871	trd_1870	Probable hydrogenase nickel incorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Hydrogenase accessory protein HypB; Identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073.	0.987
hypA	hypC	trd_1871	trd_1869	Probable hydrogenase nickel incorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Hydrogenase assembly chaperone HypC/HupF; Identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074.	0.910
hypA	hypD	trd_1871	trd_1867	Probable hydrogenase nickel incorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Hydrogenase expression/formation protein HypD; Identified by match to protein family HMM PF01924; match to protein family HMM TIGR00075.	0.921
hypA	trd_1865	trd_1871	trd_1865	Probable hydrogenase nickel incorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Phosphoheptose isomerase.	0.721
hypA	trd_1873	trd_1871	trd_1873	Probable hydrogenase nickel incorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	F420-nonreducing hydrogenase; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072.	0.788
hypA	trd_1874	trd_1871	trd_1874	Probable hydrogenase nickel incorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Conserved hypothetical protein.	0.633
hypA	trd_1875	trd_1871	trd_1875	Probable hydrogenase nickel incorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Conserved hypothetical protein.	0.604
hypA	trd_1876	trd_1871	trd_1876	Probable hydrogenase nickel incorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.	0.582
hypA	trd_1877	trd_1871	trd_1877	Probable hydrogenase nickel incorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Nickel-dependent hydrogenase, large subunit; Identified by match to protein family HMM PF00374.	0.924
hypA	trd_1878	trd_1871	trd_1878	Probable hydrogenase nickel incorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	Nickel-dependent hydrogenase, small subunit; Identified by match to protein family HMM PF01058.	0.740
hypB	hypA	trd_1870	trd_1871	Hydrogenase accessory protein HypB; Identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073.	Probable hydrogenase nickel incorporation protein hypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.	0.987
hypB	hypC	trd_1870	trd_1869	Hydrogenase accessory protein HypB; Identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073.	Hydrogenase assembly chaperone HypC/HupF; Identified by match to protein family HMM PF01455; match to protein family HMM TIGR00074.	0.954
hypB	hypD	trd_1870	trd_1867	Hydrogenase accessory protein HypB; Identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073.	Hydrogenase expression/formation protein HypD; Identified by match to protein family HMM PF01924; match to protein family HMM TIGR00075.	0.982
hypB	trd_1865	trd_1870	trd_1865	Hydrogenase accessory protein HypB; Identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073.	Phosphoheptose isomerase.	0.732
hypB	trd_1873	trd_1870	trd_1873	Hydrogenase accessory protein HypB; Identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073.	F420-nonreducing hydrogenase; Identified by match to protein family HMM PF01750; match to protein family HMM TIGR00072.	0.600
hypB	trd_1874	trd_1870	trd_1874	Hydrogenase accessory protein HypB; Identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073.	Conserved hypothetical protein.	0.579
hypB	trd_1875	trd_1870	trd_1875	Hydrogenase accessory protein HypB; Identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073.	Conserved hypothetical protein.	0.517
hypB	trd_1876	trd_1870	trd_1876	Hydrogenase accessory protein HypB; Identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073.	Conserved hypothetical protein; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.	0.517
hypB	trd_1877	trd_1870	trd_1877	Hydrogenase accessory protein HypB; Identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073.	Nickel-dependent hydrogenase, large subunit; Identified by match to protein family HMM PF00374.	0.581
hypB	trd_1878	trd_1870	trd_1878	Hydrogenase accessory protein HypB; Identified by match to protein family HMM PF02492; match to protein family HMM TIGR00073.	Nickel-dependent hydrogenase, small subunit; Identified by match to protein family HMM PF01058.	0.640

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