trd_1900 protein (Thermomicrobium roseum) - STRING interaction network

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query proteins and first shell of interactors

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second shell of interactors

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

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protein homology

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[Homology]

Score

trd_1900

Conserved hypothetical protein. (166 aa)

Predicted Functional Partners:

trd_1901

0.873

trd_1899

0.762

trd_1559

0.645

trd_1813

0.635

trd_1820

0.580

trd_0048

0.528

trd_0130

0.466

trd_1569

0.466

trd_1601

0.464

nadE

0.446

Your Current Organism:

Thermomicrobium roseum

NCBI taxonomy Id: 309801
Other names: T. roseum DSM 5159, Thermomicrobium roseum DSM 5159

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
nadE	trd_1900	trd_0459	trd_1900	Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.	Conserved hypothetical protein.	0.446
trd_0048	trd_1559	trd_0048	trd_1559	PAS domain S-box protein; Identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	c-di-GMP phosphodiesterase A; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.998
trd_0048	trd_1813	trd_0048	trd_1813	PAS domain S-box protein; Identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	Putative sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.956
trd_0048	trd_1900	trd_0048	trd_1900	PAS domain S-box protein; Identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	Conserved hypothetical protein.	0.528
trd_0130	trd_1900	trd_0130	trd_1900	NADP oxidoreductase coenzyme F420-dependent family.	Conserved hypothetical protein.	0.466
trd_1559	trd_0048	trd_1559	trd_0048	c-di-GMP phosphodiesterase A; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	PAS domain S-box protein; Identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.998
trd_1559	trd_1601	trd_1559	trd_1601	c-di-GMP phosphodiesterase A; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	Probable smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	0.495
trd_1559	trd_1813	trd_1559	trd_1813	c-di-GMP phosphodiesterase A; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	Putative sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.999
trd_1559	trd_1820	trd_1559	trd_1820	c-di-GMP phosphodiesterase A; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	DNA repair protein radC homolog; Identified by match to protein family HMM PF04002; match to protein family HMM TIGR00608; Belongs to the UPF0758 family.	0.503
trd_1559	trd_1900	trd_1559	trd_1900	c-di-GMP phosphodiesterase A; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	Conserved hypothetical protein.	0.645
trd_1559	trd_1901	trd_1559	trd_1901	c-di-GMP phosphodiesterase A; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	Hypothetical protein; Identified by glimmer; putative.	0.495
trd_1569	trd_1900	trd_1569	trd_1900	Prephenate dehydrogenase; Identified by match to protein family HMM PF02153; match to protein family HMM PF02737; match to protein family HMM PF03807.	Conserved hypothetical protein.	0.466
trd_1601	trd_1559	trd_1601	trd_1559	Probable smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	c-di-GMP phosphodiesterase A; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.495
trd_1601	trd_1813	trd_1601	trd_1813	Probable smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Putative sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.472
trd_1601	trd_1900	trd_1601	trd_1900	Probable smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	Conserved hypothetical protein.	0.464
trd_1813	trd_0048	trd_1813	trd_0048	Putative sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	PAS domain S-box protein; Identified by match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.956
trd_1813	trd_1559	trd_1813	trd_1559	Putative sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	c-di-GMP phosphodiesterase A; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.999
trd_1813	trd_1601	trd_1813	trd_1601	Putative sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	Probable smf protein; Identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732.	0.472
trd_1813	trd_1820	trd_1813	trd_1820	Putative sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	DNA repair protein radC homolog; Identified by match to protein family HMM PF04002; match to protein family HMM TIGR00608; Belongs to the UPF0758 family.	0.584
trd_1813	trd_1900	trd_1813	trd_1900	Putative sensory box protein; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF08447; match to protein family HMM PF08448; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	Conserved hypothetical protein.	0.635