trd_1934 protein (Thermomicrobium roseum) - STRING interaction network

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Score

trd_1934

Putative cobyric acid synthase; Identified by match to protein family HMM PF07685. (254 aa)

Predicted Functional Partners:

trd_1936

0.999

trd_0929

0.900

trd_0739

0.800

trd_1937

0.768

murE

0.761

trd_1938

0.746

trd_1939

0.673

trd_1940

0.424

Your Current Organism:

Thermomicrobium roseum

NCBI taxonomy Id: 309801
Other names: T. roseum DSM 5159, Thermomicrobium roseum DSM 5159

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
murE	trd_0929	trd_0930	trd_0929	UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.	Identified by match to protein family HMM PF02388.	0.820
murE	trd_1934	trd_0930	trd_1934	UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.	Putative cobyric acid synthase; Identified by match to protein family HMM PF07685.	0.761
trd_0739	trd_1934	trd_0739	trd_1934	Putative cyanophycin synthetase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.	Putative cobyric acid synthase; Identified by match to protein family HMM PF07685.	0.800
trd_0929	murE	trd_0929	trd_0930	Identified by match to protein family HMM PF02388.	UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.	0.820
trd_0929	trd_1934	trd_0929	trd_1934	Identified by match to protein family HMM PF02388.	Putative cobyric acid synthase; Identified by match to protein family HMM PF07685.	0.900
trd_0929	trd_1936	trd_0929	trd_1936	Identified by match to protein family HMM PF02388.	Hypothetical tripeptide synthase involved in murein formation; Identified by match to protein family HMM PF08245; match to protein family HMM PF08353.	0.910
trd_1934	murE	trd_1934	trd_0930	Putative cobyric acid synthase; Identified by match to protein family HMM PF07685.	UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.	0.761
trd_1934	trd_0739	trd_1934	trd_0739	Putative cobyric acid synthase; Identified by match to protein family HMM PF07685.	Putative cyanophycin synthetase; An automated process has identified a potential problem with this gene model; the current end5 and/or the end3 may need to extended or the current gene model may need to be merged with a neighboring gene model; the current gene model (or a revised gene model) may contain a premature stop.	0.800
trd_1934	trd_0929	trd_1934	trd_0929	Putative cobyric acid synthase; Identified by match to protein family HMM PF07685.	Identified by match to protein family HMM PF02388.	0.900
trd_1934	trd_1936	trd_1934	trd_1936	Putative cobyric acid synthase; Identified by match to protein family HMM PF07685.	Hypothetical tripeptide synthase involved in murein formation; Identified by match to protein family HMM PF08245; match to protein family HMM PF08353.	0.999
trd_1934	trd_1937	trd_1934	trd_1937	Putative cobyric acid synthase; Identified by match to protein family HMM PF07685.	Rod shape-determining protein; Involved in formation and maintenance of cell shape.	0.768
trd_1934	trd_1938	trd_1934	trd_1938	Putative cobyric acid synthase; Identified by match to protein family HMM PF07685.	Rod shape-determining protein mreB; Identified by match to protein family HMM PF06723; match to protein family HMM TIGR00904.	0.746
trd_1934	trd_1939	trd_1934	trd_1939	Putative cobyric acid synthase; Identified by match to protein family HMM PF07685.	Lipoprotein precursor; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551.	0.673
trd_1934	trd_1940	trd_1934	trd_1940	Putative cobyric acid synthase; Identified by match to protein family HMM PF07685.	Conserved hypothetical protein TIGR00147; Identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147.	0.424
trd_1936	trd_0929	trd_1936	trd_0929	Hypothetical tripeptide synthase involved in murein formation; Identified by match to protein family HMM PF08245; match to protein family HMM PF08353.	Identified by match to protein family HMM PF02388.	0.910
trd_1936	trd_1934	trd_1936	trd_1934	Hypothetical tripeptide synthase involved in murein formation; Identified by match to protein family HMM PF08245; match to protein family HMM PF08353.	Putative cobyric acid synthase; Identified by match to protein family HMM PF07685.	0.999
trd_1936	trd_1937	trd_1936	trd_1937	Hypothetical tripeptide synthase involved in murein formation; Identified by match to protein family HMM PF08245; match to protein family HMM PF08353.	Rod shape-determining protein; Involved in formation and maintenance of cell shape.	0.807
trd_1936	trd_1938	trd_1936	trd_1938	Hypothetical tripeptide synthase involved in murein formation; Identified by match to protein family HMM PF08245; match to protein family HMM PF08353.	Rod shape-determining protein mreB; Identified by match to protein family HMM PF06723; match to protein family HMM TIGR00904.	0.774
trd_1936	trd_1939	trd_1936	trd_1939	Hypothetical tripeptide synthase involved in murein formation; Identified by match to protein family HMM PF08245; match to protein family HMM PF08353.	Lipoprotein precursor; Identified by match to protein family HMM PF01476; match to protein family HMM PF01551.	0.683
trd_1936	trd_1940	trd_1936	trd_1940	Hypothetical tripeptide synthase involved in murein formation; Identified by match to protein family HMM PF08245; match to protein family HMM PF08353.	Conserved hypothetical protein TIGR00147; Identified by match to protein family HMM PF00781; match to protein family HMM TIGR00147.	0.422