STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTN_0239Inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family. (326 aa)    
Predicted Functional Partners:
CTN_0238
ABC transporter related.
 
 0.962
CTN_0240
Sugar binding protein of ABC transporter.
 
 
 0.927
CTN_0576
Sugar ABC transporter, periplasmic sugar-binding protein.
 
 0.855
CTN_1618
Ribose ABC transporter, periplasmic ribose-binding protein.
 
 0.850
CTN_0364
Putative periplasmic binding protein.
 
 
 0.844
CTN_0777
Periplasmic binding protein/LacI transcriptional regulator precursor.
 
 
 0.839
rbsA-3
Ribose import ATP-binding protein rbsA 2; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.807
CTN_0361
ABC transporter related.
 
 0.781
rbsA
Ribose import ATP-binding protein rbsA 1; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.774
rbsA-2
ABC transporter related; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 0.772
Your Current Organism:
Thermotoga neapolitana
NCBI taxonomy Id: 309803
Other names: T. neapolitana DSM 4359, Thermotoga neapolitana ATCC 49049, Thermotoga neapolitana DSM 4359, Thermotoga neapolitana JCM 10099, Thermotoga neapolitana NS-E
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