STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTN_0565Metal transport system ATP-binding protein. (240 aa)    
Predicted Functional Partners:
CTN_0564
Metal transport system membrane protein.
 
 0.999
CTN_0566
Uncharacterized periplasmic metal-binding protein.
 
 
 0.999
CTN_0567
Ferric uptake regulation protein; Belongs to the Fur family.
  
  
 0.888
CTN_0563
Response regulator.
     
 0.815
CTN_0562
Sensor histidine kinase.
     
 0.814
CTN_0724
Putative cobalt import ATP-binding protein cbiO.
 
  
0.551
CTN_1824
Galactosyltransferase-related protein.
     
 0.479
CTN_1825
Galactosyltransferase-related protein.
     
 0.479
CTN_1256
ABC transporter, ATP-binding protein.
  
     0.466
CTN_0568
L-lysine 2,3-aminomutase.
       0.439
Your Current Organism:
Thermotoga neapolitana
NCBI taxonomy Id: 309803
Other names: T. neapolitana DSM 4359, Thermotoga neapolitana ATCC 49049, Thermotoga neapolitana DSM 4359, Thermotoga neapolitana JCM 10099, Thermotoga neapolitana NS-E
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