Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CTN_0664Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein. (617 aa)    
Predicted Functional Partners:
CTN_0665
Oligopeptide ABC transporter, permease protein.
 
   0.931
CTN_0666
Oligopeptide ABC transporter, permease protein.
 
   0.930
CTN_1349
Binding-protein-dependent transport systems inner membrane component.
  
   0.837
CTN_1350
Binding-protein-dependent transport systems inner membrane component.
  
   0.822
CTN_1376
Oligopeptide ABC transporter, permease protein.
  
   0.807
CTN_0621
Binding-protein-dependent transport system inner membrane component.
  
   0.804
CTN_0668
ABC transporter related.
 
   0.790
CTN_0620
Oligopeptide ABC transporter, permease protein.
  
   0.777
CTN_0663
ROK family protein.
     
 0.776
CTN_0662
Binding-protein-dependent transport systems inner membrane component.
       0.773
Your Current Organism:
Thermotoga neapolitana
NCBI taxonomy Id: 309803
Other names: T. neapolitana DSM 4359, Thermotoga neapolitana ATCC 49049, Thermotoga neapolitana DSM 4359, Thermotoga neapolitana JCM 10099, Thermotoga neapolitana NS-E
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