STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTN_0664Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein. (617 aa)    
Predicted Functional Partners:
CTN_0665
Oligopeptide ABC transporter, permease protein.
 
   0.924
CTN_0666
Oligopeptide ABC transporter, permease protein.
 
   0.923
CTN_1349
Binding-protein-dependent transport systems inner membrane component.
  
   0.821
CTN_1350
Binding-protein-dependent transport systems inner membrane component.
  
   0.803
CTN_1376
Oligopeptide ABC transporter, permease protein.
  
   0.788
CTN_0621
Binding-protein-dependent transport system inner membrane component.
  
   0.784
CTN_0663
ROK family protein.
       0.775
CTN_0662
Binding-protein-dependent transport systems inner membrane component.
       0.773
CTN_0668
ABC transporter related.
 
    0.768
CTN_0660
Extracellular solute-binding protein, family 1 precursor.
       0.762
Your Current Organism:
Thermotoga neapolitana
NCBI taxonomy Id: 309803
Other names: T. neapolitana DSM 4359, Thermotoga neapolitana ATCC 49049, Thermotoga neapolitana DSM 4359, Thermotoga neapolitana JCM 10099, Thermotoga neapolitana NS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.