STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTN_1069Fe-hydrogenase, subunit gamma. (164 aa)    
Predicted Functional Partners:
CTN_1068
Fe-hydrogenase beta subunit.
 0.999
CTN_0688
NADH dehydrogenase.
 0.996
CTN_0458
NADP-reducing hydrogenase, subunit C.
 0.994
CTN_1067
Fe-hydrogenase alpha subunit.
 
 
 0.988
CTN_1354
Glutamate synthase, beta subunit.
  
 0.969
CTN_0485
NADP-reducing hydrogenase, subunit D.
 
 0.946
CTN_1355
NADH dehydrogenase; Belongs to the complex I 49 kDa subunit family.
  
 0.938
CTN_1357
NADH dehydrogenase; Belongs to the complex I 20 kDa subunit family.
  
 0.937
CTN_1356
NADH-quinone oxidoreductase.
  
 0.936
CTN_1071
4Fe-4S ferredoxin, iron-sulfur binding domain protein.
  
 
 0.927
Your Current Organism:
Thermotoga neapolitana
NCBI taxonomy Id: 309803
Other names: T. neapolitana DSM 4359, Thermotoga neapolitana ATCC 49049, Thermotoga neapolitana DSM 4359, Thermotoga neapolitana JCM 10099, Thermotoga neapolitana NS-E
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