STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTN_1070Stage II sporulation E family protein. (379 aa)    
Predicted Functional Partners:
CTN_1072
Hypothetical Protein.
 
     0.962
CTN_1071
4Fe-4S ferredoxin, iron-sulfur binding domain protein.
 
     0.955
CTN_1068
Fe-hydrogenase beta subunit.
       0.851
CTN_1067
Fe-hydrogenase alpha subunit.
 
    0.843
CTN_1237
Inosine-5-monophosphate dehydrogenase-related protein.
 
 
 0.841
CTN_1306
ThiH protein.
  
  
 0.814
CTN_1069
Fe-hydrogenase, subunit gamma.
       0.790
rex-2
Redox-sensing transcriptional repressor rex 2; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
       0.776
CTN_1051
Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.762
CTN_1488
Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
 
 0.762
Your Current Organism:
Thermotoga neapolitana
NCBI taxonomy Id: 309803
Other names: T. neapolitana DSM 4359, Thermotoga neapolitana ATCC 49049, Thermotoga neapolitana DSM 4359, Thermotoga neapolitana JCM 10099, Thermotoga neapolitana NS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.