STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTN_1118Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family. (267 aa)    
Predicted Functional Partners:
CTN_1193
Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.
 
 
 0.943
CTN_0526
Geranyltranstransferase; Belongs to the FPP/GGPP synthase family.
  
  
 
0.922
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
 
  
 0.918
CTN_1138
Heptaprenyl diphosphate synthase component I precursor.
  
 
 0.916
CTN_1119
Putative uncharacterized protein.
 
     0.811
CTN_1115
FAD dependent oxidoreductase precursor.
  
 
 0.704
CTN_1923
Hydrolase of the metallo-beta-lactamase superfamily-like protein.
  
    0.653
CTN_1116
4Fe-4S ferredoxin iron-sulfur binding domain protein.
     
 0.652
CTN_1113
Electron transfer flavoprotein, beta subunit.
  
    0.628
CTN_1117
Putative uncharacterized protein.
       0.628
Your Current Organism:
Thermotoga neapolitana
NCBI taxonomy Id: 309803
Other names: T. neapolitana DSM 4359, Thermotoga neapolitana ATCC 49049, Thermotoga neapolitana DSM 4359, Thermotoga neapolitana JCM 10099, Thermotoga neapolitana NS-E
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