Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CTN_1306ThiH protein. (474 aa)    
Predicted Functional Partners:
CTN_0227
Small GTP-binding protein.
  
 0.949
CTN_1307
Putative uncharacterized protein.
 
     0.946
thiC
Thiamine biosynthesis protein thiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.
  
  
 0.904
CTN_0485
NADP-reducing hydrogenase, subunit D.
 
   
 0.865
CTN_1227
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.842
CTN_1305
Putative uncharacterized protein.
       0.811
CTN_1070
Stage II sporulation E family protein.
  
    0.806
CTN_1067
Fe-hydrogenase alpha subunit.
 
   
 0.793
CTN_1051
Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
    0.768
CTN_1488
Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
    0.768
Your Current Organism:
Thermotoga neapolitana
NCBI taxonomy Id: 309803
Other names: T. neapolitana DSM 4359, Thermotoga neapolitana ATCC 49049, Thermotoga neapolitana DSM 4359, Thermotoga neapolitana JCM 10099, Thermotoga neapolitana NS-E
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