STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTN_1481TrkA-N domain protein precursor. (147 aa)    
Predicted Functional Partners:
CTN_1480
TrkA-N domain protein.
 
 
  
0.997
CTN_1479
Potassium uptake protein, TrkH family.
 
 
 0.992
CTN_1482
Rhomboid family protein.
       0.809
CTN_1483
Putative uncharacterized protein.
       0.809
CTN_0981
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
   0.647
metG
Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
       0.640
hisS
Histidyl-tRNA synthetase.
       0.604
prmA
Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.
  
    0.584
CTN_1488
Putative anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family.
  
    0.580
CTN_1489
Ribose-5-phosphate isomerase.
     
 0.566
Your Current Organism:
Thermotoga neapolitana
NCBI taxonomy Id: 309803
Other names: T. neapolitana DSM 4359, Thermotoga neapolitana ATCC 49049, Thermotoga neapolitana DSM 4359, Thermotoga neapolitana JCM 10099, Thermotoga neapolitana NS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.