STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CTN_1830Glycoside hydrolase, family 4. (469 aa)    
Predicted Functional Partners:
CTN_1375
Extracellular solute-binding protein family 5 precursor.
  
     0.674
CTN_1826
Flavodoxin/nitric oxide synthase.
       0.639
CTN_1827
Flavodoxin/nitric oxide synthase.
       0.639
CTN_1828
Oxidoreductase.
       0.639
menG
Menaquinone biosynthesis methyltransferase ubiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).
       0.639
CTN_0622
Periplasmic binding protein.
  
     0.619
CTN_1341
Alpha-mannosidase-related protein.
 
   
 0.538
CTN_0457
Auxin Efflux Carrier.
  
     0.524
CTN_1831
Phosphoribulokinase/uridine kinase precursor.
       0.480
CTN_1823
Glycosyl transferase family 2.
 
     0.476
Your Current Organism:
Thermotoga neapolitana
NCBI taxonomy Id: 309803
Other names: T. neapolitana DSM 4359, Thermotoga neapolitana ATCC 49049, Thermotoga neapolitana DSM 4359, Thermotoga neapolitana JCM 10099, Thermotoga neapolitana NS-E
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.