Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CTN_0121 | CTN_0284 | CTN_0121 | CTN_0284 | Aspartokinase II. | Threonine dehydratase catabolic. | 0.768 |
CTN_0121 | CTN_1920 | CTN_0121 | CTN_1920 | Aspartokinase II. | Serine acetyltransferase. | 0.897 |
CTN_0121 | CTN_1921 | CTN_0121 | CTN_1921 | Aspartokinase II. | Cysteine synthase. | 0.478 |
CTN_0121 | glyA | CTN_0121 | CTN_1864 | Aspartokinase II. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.567 |
CTN_0121 | thrB | CTN_0121 | CTN_0123 | Aspartokinase II. | Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily. | 0.999 |
CTN_0121 | trpA | CTN_0121 | CTN_0553 | Aspartokinase II. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.699 |
CTN_0121 | trpB | CTN_0121 | CTN_0551 | Aspartokinase II. | Tryptophan synthase beta chain 1; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.543 |
CTN_0131 | CTN_0284 | CTN_0131 | CTN_0284 | Tryptophan synthase beta chain 2. | Threonine dehydratase catabolic. | 0.901 |
CTN_0131 | CTN_1191 | CTN_0131 | CTN_1191 | Tryptophan synthase beta chain 2. | Aspartate aminotransferase. | 0.900 |
CTN_0131 | CTN_1920 | CTN_0131 | CTN_1920 | Tryptophan synthase beta chain 2. | Serine acetyltransferase. | 0.800 |
CTN_0131 | glyA | CTN_0131 | CTN_1864 | Tryptophan synthase beta chain 2. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.903 |
CTN_0131 | trpA | CTN_0131 | CTN_0553 | Tryptophan synthase beta chain 2. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.978 |
CTN_0131 | trpB | CTN_0131 | CTN_0551 | Tryptophan synthase beta chain 2. | Tryptophan synthase beta chain 1; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.912 |
CTN_0284 | CTN_0121 | CTN_0284 | CTN_0121 | Threonine dehydratase catabolic. | Aspartokinase II. | 0.768 |
CTN_0284 | CTN_0131 | CTN_0284 | CTN_0131 | Threonine dehydratase catabolic. | Tryptophan synthase beta chain 2. | 0.901 |
CTN_0284 | CTN_1191 | CTN_0284 | CTN_1191 | Threonine dehydratase catabolic. | Aspartate aminotransferase. | 0.922 |
CTN_0284 | CTN_1920 | CTN_0284 | CTN_1920 | Threonine dehydratase catabolic. | Serine acetyltransferase. | 0.808 |
CTN_0284 | glyA | CTN_0284 | CTN_1864 | Threonine dehydratase catabolic. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.912 |
CTN_0284 | trpA | CTN_0284 | CTN_0553 | Threonine dehydratase catabolic. | Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.914 |
CTN_0284 | trpB | CTN_0284 | CTN_0551 | Threonine dehydratase catabolic. | Tryptophan synthase beta chain 1; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.933 |
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