SRU_0109 protein (Salinibacter ruber) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

SRU_0109

ISSru3, transposase insB; Identified by match to protein family HMM PF03400. (158 aa)

Predicted Functional Partners:

SRU_0108

0.946

SRU_0712

0.775

SRU_0732

0.775

SRU_1397

0.775

SRU_2023

0.775

SRU_2335

0.775

SRU_2455

0.775

SRU_2484

0.775

SRU_2706

0.775

SRU_0110

0.773

Your Current Organism:

Salinibacter ruber

NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
SRU_0108	SRU_0109	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	0.946
SRU_0108	SRU_0110	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	Conserved hypothetical protein.	0.773
SRU_0109	SRU_0108	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	0.946
SRU_0109	SRU_0110	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	Conserved hypothetical protein.	0.773
SRU_0109	SRU_0712	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	0.775
SRU_0109	SRU_0732	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	0.775
SRU_0109	SRU_1397	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	0.775
SRU_0109	SRU_2023	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	0.775
SRU_0109	SRU_2335	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	0.775
SRU_0109	SRU_2455	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	0.775
SRU_0109	SRU_2484	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	0.775
SRU_0109	SRU_2706	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	0.775
SRU_0110	SRU_0108	Conserved hypothetical protein.	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	0.773
SRU_0110	SRU_0109	Conserved hypothetical protein.	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	0.773
SRU_0712	SRU_0109	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	0.775
SRU_0732	SRU_0109	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	0.775
SRU_1397	SRU_0109	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	0.775
SRU_2023	SRU_0109	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	0.775
SRU_2335	SRU_0109	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	0.775
SRU_2455	SRU_0109	ISSru3, transposase insA; Identified by match to protein family HMM TIGR01199.	ISSru3, transposase insB; Identified by match to protein family HMM PF03400.	0.775