SRU_0147 protein (Salinibacter ruber) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

SRU_0147

ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005. (316 aa)

Predicted Functional Partners:

SRU_0343

0.905

SRU_0146

0.893

SRU_1250

0.821

SRU_0148

0.806

SRU_0173

0.799

ybjZ

0.771

SRU_1196

0.519

SRU_2851

0.432

atpD

0.428

nosD

0.425

Your Current Organism:

Salinibacter ruber

NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SRU_0146	SRU_0147	SRU_0146	SRU_0147	Conserved hypothetical protein.	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	0.893
SRU_0146	SRU_0148	SRU_0146	SRU_0148	Conserved hypothetical protein.	CAAX amino terminal protease family; Identified by match to protein family HMM PF02517.	0.773
SRU_0146	nosD	SRU_0146	SRU_0310	Conserved hypothetical protein.	NosD protein; Identified by match to protein family HMM PF05048.	0.741
SRU_0147	SRU_0146	SRU_0147	SRU_0146	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	Conserved hypothetical protein.	0.893
SRU_0147	SRU_0148	SRU_0147	SRU_0148	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	CAAX amino terminal protease family; Identified by match to protein family HMM PF02517.	0.806
SRU_0147	SRU_0173	SRU_0147	SRU_0173	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	Conserved hypothetical protein.	0.799
SRU_0147	SRU_0343	SRU_0147	SRU_0343	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	0.905
SRU_0147	SRU_1196	SRU_0147	SRU_1196	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	Hypothetical protein; Identified by Glimmer2; putative.	0.519
SRU_0147	SRU_1250	SRU_0147	SRU_1250	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	Probable permease of ABC transporter.	0.821
SRU_0147	SRU_2851	SRU_0147	SRU_2851	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter permease protein; Identified by match to protein family HMM PF02687.	0.432
SRU_0147	atpD	SRU_0147	SRU_2429	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.	0.428
SRU_0147	nosD	SRU_0147	SRU_0310	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	NosD protein; Identified by match to protein family HMM PF05048.	0.425
SRU_0147	ybjZ	SRU_0147	SRU_2852	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF02687.	0.771
SRU_0148	SRU_0146	SRU_0148	SRU_0146	CAAX amino terminal protease family; Identified by match to protein family HMM PF02517.	Conserved hypothetical protein.	0.773
SRU_0148	SRU_0147	SRU_0148	SRU_0147	CAAX amino terminal protease family; Identified by match to protein family HMM PF02517.	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	0.806
SRU_0173	SRU_0147	SRU_0173	SRU_0147	Conserved hypothetical protein.	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	0.799
SRU_0343	SRU_0147	SRU_0343	SRU_0147	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	0.905
SRU_0343	SRU_2851	SRU_0343	SRU_2851	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter permease protein; Identified by match to protein family HMM PF02687.	0.875
SRU_0343	ybjZ	SRU_0343	SRU_2852	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF00005.	ABC transporter, ATP-binding protein; Identified by match to protein family HMM PF02687.	0.845
SRU_1196	SRU_0147	SRU_1196	SRU_0147	Hypothetical protein; Identified by Glimmer2; putative.	ABC transporter ATP-binding protein; Identified by match to protein family HMM PF00005.	0.519