SRU_0255 protein (Salinibacter ruber) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

SRU_0255

Hypothetical protein; Identified by Glimmer2; putative. (267 aa)

Predicted Functional Partners:

SRU_2143

0.816

SRU_0254

0.671

SRU_0253

0.470

SRU_0251

0.428

SRU_0252

0.428

Your Current Organism:

Salinibacter ruber

NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
SRU_0251	SRU_0252	Sensory box/ggdef family protein, putative; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	TcrA; Identified by match to protein family HMM PF00072.	0.789
SRU_0251	SRU_0253	Sensory box/ggdef family protein, putative; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130.	0.723
SRU_0251	SRU_0254	Sensory box/ggdef family protein, putative; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	0.507
SRU_0251	SRU_0255	Sensory box/ggdef family protein, putative; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	Hypothetical protein; Identified by Glimmer2; putative.	0.428
SRU_0252	SRU_0251	TcrA; Identified by match to protein family HMM PF00072.	Sensory box/ggdef family protein, putative; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.789
SRU_0252	SRU_0253	TcrA; Identified by match to protein family HMM PF00072.	PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130.	0.723
SRU_0252	SRU_0254	TcrA; Identified by match to protein family HMM PF00072.	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	0.614
SRU_0252	SRU_0255	TcrA; Identified by match to protein family HMM PF00072.	Hypothetical protein; Identified by Glimmer2; putative.	0.428
SRU_0253	SRU_0251	PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130.	Sensory box/ggdef family protein, putative; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.723
SRU_0253	SRU_0252	PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130.	TcrA; Identified by match to protein family HMM PF00072.	0.723
SRU_0253	SRU_0254	PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130.	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	0.542
SRU_0253	SRU_0255	PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130.	Hypothetical protein; Identified by Glimmer2; putative.	0.470
SRU_0254	SRU_0251	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	Sensory box/ggdef family protein, putative; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.507
SRU_0254	SRU_0252	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	TcrA; Identified by match to protein family HMM PF00072.	0.614
SRU_0254	SRU_0253	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130.	0.542
SRU_0254	SRU_0255	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	Hypothetical protein; Identified by Glimmer2; putative.	0.671
SRU_0255	SRU_0251	Hypothetical protein; Identified by Glimmer2; putative.	Sensory box/ggdef family protein, putative; Identified by match to protein family HMM PF00563; match to protein family HMM PF00989; match to protein family HMM PF00990; match to protein family HMM PF01590; match to protein family HMM TIGR00229; match to protein family HMM TIGR00254.	0.428
SRU_0255	SRU_0252	Hypothetical protein; Identified by Glimmer2; putative.	TcrA; Identified by match to protein family HMM PF00072.	0.428
SRU_0255	SRU_0253	Hypothetical protein; Identified by Glimmer2; putative.	PBS lyase HEAT-like repeat domain protein; Identified by match to protein family HMM PF03130.	0.470
SRU_0255	SRU_0254	Hypothetical protein; Identified by Glimmer2; putative.	Glycosyl transferase, group 2 family protein; Identified by match to protein family HMM PF00535.	0.671