STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRU_0447Uncharacterized conserved membrane protein. (98 aa)    
Predicted Functional Partners:
SRU_0448
Hypothetical protein; Identified by Glimmer2; putative.
 
   
 0.909
SRU_0156
Thiol:disulfide interchange protein tlpA, putative.
   
 0.615
yneN
Thioredoxin.
   
 0.615
SRU_2089
Hypothetical protein; Identified by Glimmer2; putative.
   
 0.615
SRU_2446
Hypothetical protein; Identified by Glimmer2; putative.
   
 0.615
SRU_2596
Conserved hypothetical protein.
   
 0.615
SRU_0445
Putative sulfolipid synthase; Identified by match to protein family HMM PF00534.
  
   0.452
SRU_0446
Conserved hypothetical protein.
       0.411
Your Current Organism:
Salinibacter ruber
NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.