Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SRU_0516 | soj | SRU_0516 | SRU_0514 | Conserved hypothetical protein. | SpoOJ regulator protein; Identified by match to protein family HMM PF01656. | 0.420 |
| SRU_0516 | spo0J | SRU_0516 | SRU_0515 | Conserved hypothetical protein. | spoOJ protein; Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | 0.583 |
| dnaA | soj | SRU_0001 | SRU_0514 | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | SpoOJ regulator protein; Identified by match to protein family HMM PF01656. | 0.407 |
| dnaA | spo0J | SRU_0001 | SRU_0515 | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | spoOJ protein; Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | 0.567 |
| soj | SRU_0516 | SRU_0514 | SRU_0516 | SpoOJ regulator protein; Identified by match to protein family HMM PF01656. | Conserved hypothetical protein. | 0.420 |
| soj | dnaA | SRU_0514 | SRU_0001 | SpoOJ regulator protein; Identified by match to protein family HMM PF01656. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.407 |
| soj | spo0J | SRU_0514 | SRU_0515 | SpoOJ regulator protein; Identified by match to protein family HMM PF01656. | spoOJ protein; Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | 0.993 |
| soj | uvrd | SRU_0514 | SRU_0513 | SpoOJ regulator protein; Identified by match to protein family HMM PF01656. | ATP-dependent DNA helicase; Identified by match to protein family HMM PF00580. | 0.403 |
| spo0J | SRU_0516 | SRU_0515 | SRU_0516 | spoOJ protein; Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | Conserved hypothetical protein. | 0.583 |
| spo0J | dnaA | SRU_0515 | SRU_0001 | spoOJ protein; Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.567 |
| spo0J | soj | SRU_0515 | SRU_0514 | spoOJ protein; Identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; Belongs to the ParB family. | SpoOJ regulator protein; Identified by match to protein family HMM PF01656. | 0.993 |
| uvrd | soj | SRU_0513 | SRU_0514 | ATP-dependent DNA helicase; Identified by match to protein family HMM PF00580. | SpoOJ regulator protein; Identified by match to protein family HMM PF01656. | 0.403 |