STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRU_0768Esterase/lipase, putative. (218 aa)    
Predicted Functional Partners:
SRU_0100
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.745
SRU_1810
Antibiotic biosynthesis monooxygenase domain protein; Identified by match to protein family HMM PF03992.
  
     0.739
SRU_0696
Putative permease domain protein; Identified by match to protein family HMM PF02687.
  
     0.690
SRU_1893
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.670
SRU_1952
Hypothetical protein; Identified by Glimmer2; putative.
  
   
 0.670
SRU_1596
FAD dependent oxidoreductase, putative; Identified by match to protein family HMM PF01266; match to protein family HMM PF01494.
  
     0.650
SRU_0769
Lysine decarboxylase-like protein; Identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730.
       0.635
SRU_2203
GDSL-like lipase/acylhydrolase domain protein; Identified by match to protein family HMM PF00657.
 
   
 0.632
SRU_1923
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.563
SRU_2054
Identified by match to protein family HMM PF00903.
 
    0.525
Your Current Organism:
Salinibacter ruber
NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.