STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRU_0795Hypothetical protein; Identified by Glimmer2; putative. (411 aa)    
Predicted Functional Partners:
SRU_2401
Acylaminoacyl-peptidase; Identified by match to protein family HMM PF00326; match to protein family HMM PF07676.
  
     0.585
SRU_2034
Acyl-peptide hydrolase, putative; Identified by match to protein family HMM PF00326; match to protein family HMM PF07676.
  
     0.573
lipA
Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.
       0.558
SRU_1319
Dipeptidyl-peptidase; Identified by match to protein family HMM PF00326; match to protein family HMM PF00930.
  
     0.556
SRU_0793
Hypothetical protein; Identified by Glimmer2; putative.
      
0.528
SRU_2467
BNR repeat, putative.
  
     0.485
SRU_2720
Probable acylaminoacyl-peptidase, putative; Identified by match to protein family HMM PF00326.
  
     0.483
SRU_0944
Acylaminoacyl-peptidase; Identified by match to protein family HMM PF00326.
  
     0.477
SRU_0797
Acetyltransferase, gnat family; Identified by match to protein family HMM PF00583.
       0.450
SRU_2649
Prolyl oligopeptidase family protein, putative; Identified by match to protein family HMM PF00326; match to protein family HMM PF07676.
  
     0.441
Your Current Organism:
Salinibacter ruber
NCBI taxonomy Id: 309807
Other names: S. ruber DSM 13855, Salinibacter ruber DSM 13855, Salinibacter ruber str. DSM 13855, Salinibacter ruber strain DSM 13855
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.